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AIModelKit > Comparisons > Boost Apache Iceberg Query Performance: Amazon S3 Introduces Sort and Z-Order Compaction Features
Comparisons

Boost Apache Iceberg Query Performance: Amazon S3 Introduces Sort and Z-Order Compaction Features

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Last updated: July 16, 2025 9:06 pm
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Boost Apache Iceberg Query Performance: Amazon S3 Introduces Sort and Z-Order Compaction Features
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Amazon S3 Enhances Apache Iceberg with Sort and Z-Order Compaction

Amazon Web Services (AWS) has recently made a significant stride in optimizing data handling in its cloud environment by introducing sort and z-order compaction for Apache Iceberg tables. This enhancement, available for both S3 Tables and traditional S3 buckets using AWS Glue Data Catalog, is designed to minimize scan times and reduce engine costs associated with querying large datasets.

Contents
  • Understanding Sort Compaction
  • The Power of Z-Order Compaction
  • Implementing Apache Iceberg Compaction
  • Managing Compaction in Iceberg Tables
  • Challenges and Considerations
  • Key Insights from Field Experts
  • Availability and Costs

Understanding Sort Compaction

Sort compaction serves as a powerful tool that organizes files based on a user-defined column order. As data lakes often deal with high-ingest or frequently updated datasets, they can become cluttered with numerous small files. This accumulation can severely impact query performance and operational costs. With sort compaction, similar values are clustered together during the compaction process, effectively minimizing the number of data files that query engines need to scan.

This method offers substantial performance improvements, particularly for queries that filter data along specific dimensions. Sébastien Stormacq, a principal developer advocate at AWS, emphasizes the benefits:

"Although the default binpack strategy with managed compaction provides notable performance improvements, introducing sort and z-order compaction options delivers even greater gains for queries filtering across one or more dimensions."

The Power of Z-Order Compaction

Z-order compaction adds another layer of efficiency, especially when querying across multiple columns. This method employs a space-filling curve to optimize data layout, allowing for more effective file pruning. By clustering relevant data points intelligently, users can see tremendous enhancements during concurrent queries.

Stormacq shares his firsthand experiences with the technology, noting that transitioning from binpack to sort or z-order compaction can lead to performance improvements of threefold or more based on data layout and query patterns.

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Implementing Apache Iceberg Compaction

In the realm of Apache Iceberg, compaction functionalities can be separated into four major operations:

  1. Combining Small Files: Merging small files into larger ones for improved scanning efficiency (bin packing).

  2. Merging Delete Files: This operation ensures that delete files are appropriately integrated with existing data files.

  3. Sorting Data: Organized data based on defined query patterns enhances retrieval efficiency.

  4. Z-Order Sorting: Utilizing space-filling curves to optimize queries dependent on multiple fields.

For users of S3 Tables, this feature provides a managed experience with automatic hierarchical sorting configured according to defined table metadata, making the process more seamless.

Managing Compaction in Iceberg Tables

For general-purpose S3 buckets utilizing the Glue Data Catalog, adjustments to the compaction method can be easily configured within the Glue Data Catalog console. With these adjustments, customers can take advantage of effective compaction strategies that cater to their unique query patterns and requirements.

Industry insights from professionals like Ruben Simon, product manager at BMW, underscore the significant improvements achieved through z-ordering. Simon noted:

"At BMW’s largest big data analytics platform, we saw major query performance gains with Z-ordering. Bloom filters next would make it even more powerful."

Challenges and Considerations

While the new compaction options bring substantial improvements, they also highlight certain challenges. A notable critique arises from an article titled "S3 Managed Tables, Unmanaged Costs: The 20x Surprise with AWS S3 Tables" by Vinish Reddy Pannala and Kyle Weller. The authors point out delays and inefficiencies in compaction triggers, emphasizing that optimal configurations vary based on the reader and writer types. They noted an instance where:

"Roughly 3 hours after the table was created, S3 Tables finally triggered compaction… This exposes a deeper flaw in the S3 Tables approach."

Customers should be mindful that existing compacted files will remain unchanged. The impact of enhanced sorting or z-order methods will predominantly affect new data, unless users take the initiative to rewrite their datasets using standard Iceberg tools.

Key Insights from Field Experts

Yonatan Dolan, a principal analytics specialist at AWS, provides further perspective on the importance of file management in compaction strategies:

"Everyone talks about Sort, Z-order, and BinPack compaction… But in my benchmarks, I found something even more influential: The starting size of your files before compaction can massively impact cost."

This insight underscores the necessity of considering file sizes and configurations when optimizing for queries.

Availability and Costs

These exciting new compaction features are available in all regions where S3 Tables are supported. Additionally, they can be utilized for standard S3 buckets integrated with Glue Data Catalog. Notably, there are no specific costs associated with implementing these new features, making them a cost-effective solution for users looking to enhance performance in their data lakes.

The investment by AWS in these compaction technologies illustrates a continued commitment to improving the efficiency of managing large datasets, making it easier for organizations to derive meaningful insights from their data while optimizing costs.

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